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DEBOPRIYA2320/README.md

👩‍🔬 Debopriya

Pursuing Post graduate in Biotechnology
🌱 Genomics | 🧬 Bioinformatics | 💻 Computational Biology | 📊 Data Analysis & Proteomics

🚀 About Me

  • 🔭 Currently working on bioinformatics, genomics & proteomics projects
  • 🎓 Passionate about computational biology and data-driven research
  • 📚 Interested in integrating biotechnology with computer science
  • 💡 Always learning new tools for data analysis & visualization

🛠 Skills & Tools

  • Languages: Python, R, Bash
  • Bioinformatics Tools: BLAST, SnpEff, HISAT2, Pymol, Snakemake, STAR, featureCounts
  • Data Analysis & Visualization: DESeq2, edgeR, ggplot2, pheatmap, clusterProfiler, DAVID, KEGG, Reactome, STRING

📂 Featured Projects

🤝 Connect With Me

Popular repositories Loading

  1. DEBOPRIYA2320 DEBOPRIYA2320 Public

    Biotechnology PG Student, Interested in Genomics, Proteomics & Computational Biology

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  2. Fundamentals-of-R-Programming Fundamentals-of-R-Programming Public

    Collection of basic R programming exercises including vectors, lists, factors, data frames, and data manipulation tasks.

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  3. FASTA-File-Analysis-using-Shell-Scripting FASTA-File-Analysis-using-Shell-Scripting Public

    This repository contains a collection of shell scripts designed for analyzing DNA sequences stored in FASTA files. Each script demonstrates the use of Unix/Linux command-line tools and shell progra…

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  4. Classification-of-biological-databases Classification-of-biological-databases Public

    A project for categorizing and analyzing various biological databases based on their type and content.

  5. pseudomonas-wgs-variant-analysis pseudomonas-wgs-variant-analysis Public

    Comprehensive WGS variant analysis of Pseudomonas aeruginosa (SRR34663677) — includes quality control, alignment (BWA-MEM), variant calling (GATK), annotation (SnpEff), and AMR interpretation.

  6. pseudomonas-rnaseq-enrichment pseudomonas-rnaseq-enrichment Public

    RNA-seq expression and enrichment analysis of Pseudomonas aeruginosa (SigX mutant vs wild-type) using FastQC, fastp, STAR, featureCounts, DESeq2, and STRING to identify antibiotic stress-response p…